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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941539.1_cds_XP_016485353.1_76285
CDS Infomation

[gene=LOC107805782] [db_xref=GeneID:107805782] [protein=metal transporter Nramp5-like] [protein_id=XP_016485353.1] [location=join(19961..20065,20145..20223,20374..20414,20496..20574,20672..20776,21120..21229,22718..22899,22990..23059,23147..23320,23431..23535,23617..23748,23833..23928,24038..24367)] [gbkey=CDS]
Sequence

ATGGAGAATCACCAGCAAAACCAAGTCAATGGAGGAAGCAAGAGAATTGTAGCAGTAGCT
GAGAGTCCATTACCTTCTTCCAATAATGATCATCACGAGCCCCAGAAACATGGCTGGAAA
AATTTCTTTGCATACGTGGGACCTGGTTTCCTTGTTTCTTTGGCATATCTTGATCCAGGG
AATTTGGAAACTGATTTGCAAGCAGGAGCAAACCATGGATACGAGCTTCTTTGGGTGATT
CTCATTGGATTGATATTTGCTCTTATTATTCAATCACTTGCTGCTAATCTTGGAGTTAGC
ACTGGCAAACATTTATCAGAATTATGCAGGGCTGAATACCCAATATTTGTTAAGTACTGT
CTGTGGATTCTAGCTGAGGTTGCTGTCATTGCTGCAGATATTCCTGAAGTGATTGGGACA
GCTTTTGCTCTTAATATATTGTTCCATATTCCTGTTTGGGTTGGAGTTCTTTGCACTGGT
GTGAGTACTCTCCTCTTCATTGGCCTGCAGAGATATGGGGTGAGAAAGCTAGAATTGCTA
ATAGCAGTGCTAGTGTTCGTAATGGCGGCGTGTTTCTTCGGGGAAATGAGTTATGTAAAA
CCTCCTGCTAAAGAAGTAGTCAAAGGAATGTTCATTCCTAAGCTTAACGGTAATGGCGCC
ACCGCTGATGCTATTGCCTTGTTGGGTGCTCTCGTCATGCCGCACAACCTTTTTCTTCAC
TCAGCACTTGTGCTCTCTAGGAAAATACCACATTCGGTTCGTGGCATTAATGACGCATGT
AAATACTTCTTGATAGAGAGTGGATTTGCACTGTTTGTGGCGTTCCTAATCAATGTAGCA
GTTATCTCTGTTTCTGGTACTGTTTGCGGAGCTGACAATCTCTCTCAAGAGAATAAAGAT
AGTTGCAGCGACATCACTTTGAACTCTGCTTCTTTTCTTCTCAAGAATGTACTTGGAAAA
TCAAGTTCTACTGTTTATGCTATTGCATTATTAGCCTCGGGACAAAGCTCTACCATAACT
GGTACTTATGCTGGTCAATTTATCATGCAAGGATTCTTGGATCTTAAGATGAAGACATGG
TTAAGGAACTTGATTACTAGGCTTATTGCTATTACTCCAAGCCTTGTTGTTTCAATTATT
GGAGGATCATCTGGAGCTGGCAGGCTAATCATTATTGCTTCAATGATACTTTCTTTTGAA
CTTCCATTTGCTCTCATTCCATTGCTCAAATTCAGTAGCAGTTCCACCAAGTTAGGACCA
CACAAGAATTCAATTTATATTATCGTGATCTCGTGGATACTTGGGCTAGGAATCATTGGC
ATCAATATCTACTACCTCACCACAGCCTTTGTAGATTGGCTAATACACAACAATTTGCCT
AAAGTTGGAAATGTGTTCATTGGGATCGTAGTATTTCCGTTGATGGCTATCTATATTCTA
GCAGTGATTTACCTTATGTTTCGAAAAGACACAGTTGTTACCTACATTGACCCAATCAAG
GACAATCCAAATGCTCAACGTTATATGGAAGATGGAACAAACAATGTGGAATTGGTAGAT
CGTGTTCCTTATAGAGAGGATCTTGCTGATATCCCACTGCCACAATAA

Peptide Sequence

PEP ID

XP_016485353.1
PEP Infomation

PREDICTED: metal transporter Nramp5-like [Nicotiana tabacum]
Sequence

MENHQQNQVNGGSKRIVAVAESPLPSSNNDHHEPQKHGWKNFFAYVGPGFLVSLAYLDPG
NLETDLQAGANHGYELLWVILIGLIFALIIQSLAANLGVSTGKHLSELCRAEYPIFVKYC
LWILAEVAVIAADIPEVIGTAFALNILFHIPVWVGVLCTGVSTLLFIGLQRYGVRKLELL
IAVLVFVMAACFFGEMSYVKPPAKEVVKGMFIPKLNGNGATADAIALLGALVMPHNLFLH
SALVLSRKIPHSVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCGADNLSQENKD
SCSDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQFIMQGFLDLKMKTW
LRNLITRLIAITPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKLGP
HKNSIYIIVISWILGLGIIGINIYYLTTAFVDWLIHNNLPKVGNVFIGIVVFPLMAIYIL
AVIYLMFRKDTVVTYIDPIKDNPNAQRYMEDGTNNVELVDRVPYREDLADIPLPQ

Transcript Sequence

Gene sequence data has not been registered.